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Biological Specimen Description
To retrieve basic information on the human organs, tissues and cells covered in TranscriptoNET
Pull-down menu for a list of organ and tissue options
Click on box for options
Adipose tissue - abdominal subcutaneous - adipocytes
Adipose tissue - mesenteric - pre-adipocytes (differentiated)
Adipose tissue - mesenteric - pre-adipocytes (undifferentiated)
Adipose tissue - omental - pre-adipocytes (differentiated)
Adipose tissue - omental - pre-adipocytes (undifferentiated)
Adipose tissue - omental
Adipose tissue - subcutaneous - pre-adipocytes (differentiated)
Adipose tissue - subcutaneous - pre-adipocytes (undifferentiated)
Adipose tissue - subcutaneous
Adipose tissue - visceral omentum
Adrenal cortex
Adrenal gland
Adrenal medulla
Airway - bronchial - epithelial cells (HBEC)
Airway - bronchial - macrophages (alveolar)
Airway - bronchial - muscle cells
Airway - microvascular - endothelial cells - CD105+
Airway - microvascular - epithelial cells
Appendix
Bladder
Bladder - smooth muscle cells
Bladder - microvascular - endothelial
Bladder - mucosa
Bladder - urothelium
Blood - peripheral - B-lymphocytes
Blood - centroblasts
Blood - dendritic cells - monocyte-derived (MMDC)
Blood - erythroid progenitors - CD34+
Blood - peripheral - hematopoietic stem and progenitor cells - CD34+
Blood - hemopoietic stem cells (HSCs) - Lin-, CD34-
Blood - hemopoietic stem cells (HSCs) - Lin-, CD34+
Blood - hemopoietic stem cells (HSCs) - Lin+, CD34+
Blood - peripheral - leukocytes
Blood - lymphoblastoid cells
Blood - peripheral - lymphocytes
Blood - macrophages - CD14+
Blood - macrophages - monocyte-derived
Blood - memory B-cells
Blood - peripheral - monocytes - CD14+
Blood - peripheral - mononuclear cells (PBMC)
Blood - peripheral - natural killer (NK) lymphocytes
Blood - neutrophils
Blood - plasma cells
Blood - peripheral - platelets
Blood - peripheral - reticulocytes
Blood - peripheral - T-lymphocytes
Blood - peripheral - T-lymphocytes - CD3+
Blood - peripheral - T-lymphocytes - CD4+
Blood - peripheral - T-lymphocytes - CD8+
Blood - peripheral - T-lymphocytes (naïve) - CD3+CD4+CD8-CD45RA+CD62L+
Blood - peripheral - T-lymphocytes gamma delta - Vdelta1+
Bone marrow - endothelial cells - CD105+
Bone marrow - erythroid (early)
Bone marrow - hematopoietic stem and progenitor cells - CD34+
Bone marrow - mesenchymal stem cells
Bone marrow - mononuclear cells
Bone marrow - myeloid - CD33+
Bone marrow - plasma cells
Bone marrow - CD71+ cells
Bone marrow
Brain - astrocytes
Brain - dendritic cells - monocyte-derived (MMDC) (immature)
Brain - microglial cells (cultured)
Brain - whole
Brain - amygdala
Brain - anterior cingulate cortex (left hemisphere)
Brain - anterior inferior parietal lobule cortex (left hemisphere)
Brain - anterior inferior temporal cortex
Brain - bitofrontal cortex
Brain - caudate nucleus
Brain - cerebellum
Brain - cerebellum peduncles
Brain - cerebellum tonsils
Brain - cerebral artery
Brain - cerebral cortex
Brain - cingulate cortex
Brain - corpus
Brain - corpus callosum
Brain - cortex
Brain - entorhinal cortex
Brain - frontal
Brain - frontal cortex
Brain - frontal pole cortex (left hemisphere)
Brain - globus pallidus
Brain - hippocampal CA1
Brain - hippocampus
Brain - hypothalamus
Brain - medulla
Brain - medulla oblongata
Brain - middle frontal gyrus cortex (left hemisphere)
Brain - nucleus accumbens
Brain - occipital lobe
Brain - olfactory bulb
Brain - parietal lobe
Brain - pituitary
Brain - pons
Brain - postcentral gyrus
Brain - prefrontal cortex
Brain - substantia nigra
Brain - subthalamic nucleus
Brain - superior cervical ganglion
Brain - superior frontal gyrus
Brain - sural nerve - Schwann cells (cultured)
Brain - temporal lobe
Brain - thalamus
Brain - trigeminal ganglion
Breast - epithelial cells
Breast - interlobular - fibroblasts
Breast - stromal cells
Breast
Cartilage - chondrocytes
Cervix - epithelial cells
Cervix
Colon - mucosal cells
Colon - smooth muscle cells
Colon -
Colon - ascending
Colon - cecum
Colon - descending
Colon - rectum
Colon - sigmoid
Colon - terminal ileum
Colon - transverse
Endometrium - epithelial cells
Endometrium - decidua
Endometrium - eutopic - endothelial cells
Endometrium (early secretory)
Epididymis
Esophagus - epithelial cells
Eye - ciliary ganglion
Eye - ciliary muscle - muscle cells
Eye - conjunctiva - epithelial cells
Eye - cornea - epithelial cells
Eye - lens
Eye - optic nerve head - astrocytes
Eye - retina
Eye - trabecular meshwork - meshwork cells
Fallopian tube
Gall bladder
Head - hair follicle - bulge region - outer root sheath (ORS) cells
Head - hair follicle - non-bulge region - outer root sheath (ORS) cells
Head and neck - muscosa
Heart - cardiomyocytes
Heart - smooth muscle cells
Heart - stromal cells
Heart
Heart - aorta - smooth muscle cells
Heart - ascending bicuspid aortic valve
Heart - atrioventricular node
Heart - interventricular septum
Heart - left ventricle
Heart - left ventricular free wall - myocardial cells
Heart - microvascular - endothelial cells
Heart - middle septum
Heart - muscle - myocardial cells
Heart - right atrial appendage - myocardial cells
Heart - subendocardial left ventricle
Intestine - mucosal cells
Intestine - small
Intestine - small - duodenum
Intestine - small - ileum - mucosal cells
Intestine - small - ileum
Intestine - small - jejunum
Joints - synovial tissue
Kidney - proximal tubule - epithelial cells
Kidney - epithelial cells
Kidney
Kidney - blood vein - smooth muscle cells
Kidney - glomeruli
Leg - blood vein - saphenous - endothelial cells (cultured)
Leg knee - Popliteal - artery - smooth muscle cells
Leg knee - Popliteal - vein - smooth muscle cells
Liver - fibroblasts
Liver - hepatocytes
Liver
Liver - artery - smooth muscle cells
Lung - epithelial cells
Lung - fibroblasts
Lung
Lung - artery - endothelial cells
Lung - artery - smooth muscle cells
Lung - lower lobe
Lung - microvascular - endothelial cells
Lung - upper lobe
Lymph node
Mouth - epithelial cells
Mouth - gingiva tissue
Mouth - mucosa - mucosal cells
Muscle - skeletal - myotubes
Muscle - skeletal - stromal cells
Muscle - skeletal
Muscle - skeletal - deltoids
Muscle - skeletal - extraocular muscle
Muscle - skeletal - psoas
Muscle - skeletal - quadriceps
Muscle - skeletal - superior rectus - extraocular muscle
Muscle - skeletal - vastus lateralis
Muscle - smooth
Muscle - smooth - coronary
Muscle - smooth - diaphragm
Nose - epithelial cells
Ovary - endometrial cells
Ovary - oocytes
Ovary - theca cells
Ovary - surface - epithelial cells
Ovary
Pancreas
Pancreas - islet
Pelvis - artery - iliaic - endothelial cells
Pituitary
Placenta
Placenta - basal plate (37-40 weeks)
Pleural (chest)
Prostate - basal cells - CD104+
Prostate - endothelial cells - CD31+
Prostate - luminal secretory - CD26a+
Prostate - smooth muscle cells
Prostate - stromal cells
Prostate
Salivary gland
Skeletal muscle
Skin - dermal - endothelial cells
Skin - epidermal stem cells (cultured)
Skin - fibroblasts
Skin - epidermis - keratinocytes
Skin - melanocytes
Skin - upper nates
Skin
Skin - abdominal subcutaneous - preadipocytes
Skin - abdominal subcutaneous - preadipocytes
Sperm
Spinal cord
Spinal cord - afferent - dorsal route ganglion (DRG)
Spinal cord - grey matter
Spinal cord - superior cervical ganglion
Spleen - smooth muscle cells
Spleen
Stomach - muscosal cells
Stomach
Teeth - pulpal tissue
Testis - germ cells
Testis - interstitial cells
Testis - Leydig cells
Testis
Testis - seminiferous tubule
Thymus
Thymus - stromal cells
Thyroid - epithelial cells
Thyroid
Tibial - artery - smooth muscle cells
Tongue
Tonsil
Tonsil - high endothelial venules - endothelial cells (HEVEC)
Trachea
Umbilical cord - mesenchymal stem cells
Umbilical cord - reticulocytes (fetal)
Umbilical cord - vein - vascular endothelial cells (HUVEC)
Umbilical cord - mast cells
Umbilical cord - artery - endothelial cells
Umbilical cord - blood - hematopoietic stem and progenitor cells - CD34+
Umbilical cord - blood - naïve T-lymphocytes - CD3+CD4+CD8-CD45RA+CD62L+
Ureter - smooth muscle cells
Urethra - smooth muscle cells
Uterus - smooth muscle cells
Uterus
Uterus - corpus
Uterus - endometrium - endometrial cells (ambiguous phase)
Uterus - endometrium - stromal cells
Uterus - microvascular - endothelial cells
Uterus - myometrium - myometrial cells
Uterus - smooth muscle
Vagina - epithelial cells
Bladder - bladder carcinomas
Blood - Hodgkin lymphomas (classical)
Blood - Hodgkin lymphomas (nodular lymphocyte-predominant)
Blood - large B-cell lymphomas
Blood - T-cell prolymphocytic leukemia
Bone marrow - chronic lymphocytic leukemia (CLL)
Bone marrow - chronic myelogenous leukemia (CML)
Bone marrow - multiple myelomas (MM)
Brain - glioblastomas
Brain - oligodendrogliomas
Breast - epithelial carcinomas
Breast - non-basal-like cancer (BLC)
Breast - sporadic basal-like cancer (BLC)
Breast - stromal carcinomas
Breast - ductal - epithelial carcinomas
Breast - lobular - epithelial carcinomas
Breast - lobular, terminal duct - hyperplastic enlarged lobular units (HELU) - epithelial
Cervix - cervical carcinomas
Cervix - cervical carcinomas stage 1B
Cervix - cervical carcinomas stage 2A
Cervix - cervical carcinomas stage 2B
Cervix - squamous cell carcinomas
Cervix - vulvar intraepithelial neoplasia
Colon - colorectal adenocarcinomas
Esophagus - epithilial adenocarcinomas and metaplasia
Head and Neck - squamous cell carcinomas (HNSCC)
Joints - synovial sarcomas
Kidney - clear cell renal cell carcinomas (cRCC)
Kidney - clear cell renal cell carcinomas (cRCC) stage I
Kidney - clear cell renal cell carcinomas (cRCC) stage II
Kidney - Wilm's tumours
Lung - adenocarcinomas
Mouth - oral squamous cell carcinomas (OSCC)
Muscle - smooth - leiomyosarcomas
Ovary - adenocarcinomas
Pituitary - adenomas (ACTH-secreting)
Pituitary - adenomas (aldosterone-secreting)
Pleura - malignant pleural mesotheliomas (MPM)
Prostate - prostate cancer
Prostate - prostate cancer - metastatic
Skin - fibrosarcomas
Skin - melanomas - malignant
Skin - squamous cell carcinomas
Soft tissue - malignant fibrous histiocytomas (MFH)
Stomach - gastric cancer
Thyroid - papillary thyroid carcinomas (PTC)
Uterus - uterine fibroids
Uterus - uterine leiomyomas from fibroids
Uterus - smooth muscle - uterine leiomyomas
Uterus - smooth muscle - uterine leiomyosarcomas
Pull-down menu for a list cell lines
Click on box for options
224 melanoma cell line
22Rv1 prostate carcinoma cell line
293T renal epithelial cell line
4vhl kidney carcinoma cells
518A2 malignant melanoma cell line
607B malignant melanoma cell line
721 B-lymphoblasts
786 renal adenocarcinoma cell line
A375 malignant melanoma cell line
A431 epidermoid carcinoma cell line
A498 renal carcinoma cell line
A549 non-small cell lung carcinoma (NSCLC), aveolar epithelial carcinoma cell line
A673 Ewing sarcoma cell line
ABC-1 cell line
ACC3 - adenoid cystic carcinoma (ACC) derived cells
ACHN renal cell adenocarcinoma cell line
ARPE-19 retinal pigment epithelial cells
BDCA4+ dendritic cancer cell line
BEAS 2B bronchial epithelial cell line
BEAS bronchial epithelial cell line
BeWo trophoblast cell line
BJABK3 B-cell line
BL41K3 B-cell line
BT-20 breast carcinoma cell line
BT-474 ductal carcinoma cell line
BT-549 ductal carcinoma cell line
BV173 acute lymphoblastic leukemia cell line
C-33A cervical cancer cell line
C4-I cervical cancer cell line
C8161 melanoma cell line
Caco-2 colorectal adenocarcinoma cell line
CAKI kidney cancer cell line
Calu-3 NSCLC lung epithelial cell line
CaSki cervical cancer cell line
CC-2571 aortic smooth muscle cell line
CCRF_CEM leukemia cell line
CEM-C1 T cell lymphoblastic leukemia cell line
CHP-126 neuroblastoma cell line
CL1-5 lung adenocarcinoma cell line
COLO205 colon cancer cell line
DAOY medulloblastoma cell line
Daudi Burkitt's lymphoma cell line
Detroit 562 pharyngeal epithelial cell line
DMS-53 SCLC cell line
DU145 prostate cancer cell line
DUCaP prostate cancer cell line
EBC-1 cell line
EKV4 non-small cell lung cancer cell line
G361 melanoma cell line
GM5659 skin fibroblasts
GSM2170 melanoma cell line
H125 NSCLC cell line
H1299 NSCLC lung carcinoma cell line
H1334 NSCLC cell line
H1395 NSCLC cell line
H1437 NSCLC cell line
H157 NSCLC cell line
H1648 NSCLC cell line
H1650 NSCLC cell line
H1703 NSCLC cell line
H1770 NSCLC cell line
H1975 NSCLC cell line
H1993 NSCLC cell line
H2009 NSCLC cell line
H2087 NSCLC cell line
H2122 NSCLC cell line
H2126 NSCLC cell line
H2279 NSCLC cell line
H2347 NSCLC cell line
H2882 NSCLC cell line
H2887 NSCLC cell line
H292 bronchial epithelial cells
H295R adrenocortical carcinoma cell line
H322 NSCLC cell line
H3255 NSCLC cell line
H358 NSCLC cell line
H460 NSCLC cell line
H520 NSCLC cell line
H69 cell line
H69AR SCLC cell line
H820 NSCLC cell line
HaCaT head and neck squamous cell carcinoma cells
HCC1171 NSCLC cell line
HCC1195 NSCLC cell line
HCC1359 NSCLC cell line
HCC15 NSCLC cell line
HCC193 NSCLC cell line
HCC1954 breast cancer cell line
HCC2998 colon cancer cell line
HCC366 NSCLC cell line
HCC4006 NSCLC cell line
HCC44 NSCLC cell line
HCC461 NSCLC cell line
HCC515 NSCLC cell line
HCC78 NSCLC cell line
HCC827 lung adenocarcinoma (NSCLC) cell line
HCC95 NSCLC cell line
HCT-116 colon cancer cell line
HCT15 colon cancer cell line
HeLa cervical adenocarcinoma cell line
HepG2 hepatoma cell line
HIGK gingival epithelial cell line
HL-60 leukemia promyelocytic cell line
HME-CC breast epithelial cancer cell line
HOP62 non-small cell lung cancer cell line
HOP92 non-small cell lung cancer cell line
HPB-ALL T-ALL cell line
HPR-1 prostate cancer cell line
HPV10 prostate cancer cell line
HPV7 prostate cancer cell line
HS578T cancer cell line
Hs683 glial cell line
HT1080 fibrosarcoma cell line
HT29 colon cancer cell line
HT29 derived colon cancer cell line
HT-3 cervical cancer cell line
IB3-1 bronchial epithelial model cell line
IGROV1 ovarian cancer cell line
Immortalized ovarian surface epithelial (IOSE) cells
IMR-32 neuroblastoma cells
JEG3 trophoblast cell line
JEKO-1 mantle cell lymphoma (MCL) cell line
JMN1B malignant pleural mesothelioma cell line
Jurkat CD4+ T cells
K562 leukemia chronic myelogenous cell line
K562A leukemia cell line
KF serous adenocarcinoma cell line
KF28 serous adenocarcinoma cell line
KFr13T4 serous adenocarcinoma cell line
KK clear cell adenocarcinoma cell line
KM109 skeletal myoblast cell line
KM12 colon cancer cell line
KOPT-K1 T-ALL cell line
LAPC4 cell line
LC1/sq cell line
LC-1F cell line
LC2/ad cell line
LCL 721 B lymphoblast cell line
LK2 cell line
LNCaP prostate cancer cell line
LO4IMVI melanoma cell line
Lu130 cell line
LU135 cell line
Lu139 cell line
Lu165 cell line
LU65 cell line
M091 acute myelogenous leukemia cell line
M14 melanoma cell line
MALME_3M melanoma cell line
MCF-10A mammary epithelial cell line
MCF-7 breast carcinoma cell line
MCF-7aro breast cancer
MCF7D breast cancer cell line
MDA_MB23 breast cancer cell line
MDA_MB435 breast cancer cell line
MDA_N breast cancer cell line
MDA2A cell line
MDA2B cell line
MDA-MB-231 breast cancer cell line
MDA-MB436 breast cancer cell line
MDAPCa2b prostate cancer cell line
ME16C breast epithelial cancer cell line
ME-180 cervical cancer cell line
MelJUSO malignant melanoma cell line
MOLT-4 T-cell acute lymphoblastic leukemia (T-ALL) cell line
MS-1 cell line
MS428 malignant pleural mesothelioma cell line
MS589 malignant pleural mesothelioma cell line
MS751 cervical cancer cell line
MSTO-211H malignant pleural mesothelioma cell line
Myelogenous K562 cell line
N231 cell line
NB11 prostate cancer cell line
NB26 prostate cancer cell line
NB4 promyelocytic cells
NCEB-1 mantle cell lymphoma (MCL) cell line
NCI_H226 (NSCLC) lung cancer cell line
NCI_H23 (NSCLC) lung cancer cell line
NCI_H322 (NSCLC) lung cancer cell line
NCI_H460 (NSCLC) lung cancer cell line
NCI_H522 (NSCLC) lung cancer cell line
NCI-H1417 lung cancer cell line
NCI-H146 (SCLC) lung cancer cell line
NCI-H187 (SCLC) lung cancer cell line
NCI-H196 (SCLC) lung cancer cell line
NCI-H1963 lung cancer cell line
NCI-H209 (SCLC) lung cancer cell line
NCI-H211 lung cancer cell line
NCI-H345 (SCLC) lung cancer cell line
NCI-H510 lung cancer cell line
NCI-H524 lung cancer cell line
NCI-H82 (SCLC) lung cancer cell line
NCI-H889 cell line
Neo6 melanoma cell line
OVCAR-3 ovarian cancer cell line
OVCAR-4 ovarian cancer cell line
OVCAR-5 ovarian cancer cell line
OVCAR-8 ovarian cancer cell line
OVISE clear cell adenocarcinoma cell line
OVR278S
OYTOKO clear cell adenocarcinoma cell line
P493-6 Burkitt's lymphoma cell line
PC-1 cell line
PC-10 cell line
PC-14 cell line
PC-3 prostate cancer cell line
PC-6 cell line
PC-7 cell line
PC-9 cell line
PE13TG tumour cell line - CD44+
PE15TG tumour cell line - CD44+
PE13TG_B tumour cell line - CD44+
PE15TG_B tumour cell line - CD44+
PPC cell line
PWR1E prostate cancer cell line
QG-56 cell line
R11 neurosphere-like glioma cell line - CD133+
R18 neurosphere-like glioma cell line - CD133+
R28 neurosphere-like glioma cell line - CD133+
R43 adherent glioma cell line - CD133-
R46 adherent glioma stem cell line - CD133-
R4F_393 kidney cancer cell line
R8 adherent glioma cell line - CD133-
Raji Burkitt's lymphoma cell line
REC mantle cell lymphoma (MCL) cell line
RERF LC-KJ cell line
RERF LC-MS cell line
RERF-LC-AI cell line
RKO colorectal carcinoma cell line
RMG1 clear cell adenocarcinoma cell line
RPMI leukemia cell line
RWPE1 prostate cancer cell line
RWPE2 prostate cancer cell line
SBC3 cell line
SBC-5 cell line
SCC-012 head and neck squamous cell carcinoma cells
SCC-1 head and neck squamous cell carcinoma cells
SCC-6 head and neck squamous cell carcinoma cells
SF268 CNS cancer cell line
SF295 CNS cancer cell line
SF539 CNS cancer cell line
SHIN3 serous adenocarcinoma cell line
SH-SY5Y neuroblastoma cell line
SiHa cervical cancer cell line
SIMA neuroblastoma cell line
SK_MEL2 melanoma cell line
SK_MEL28 melanoma cell line
SK_MEL5 melanoma cell line
SKBR3 breast adenocarcinoma cell line
SKGT4 esophagus cell line
SK-MEL-2 melanoma cell line
SK-N-MC neuroblastoma cell line
SK-N-SH neuroblastoma cell line
SKOV3 serous adenocarcinoma cell line
SNB19 CNS cancer cell line
SNB75 CNS cancer cell line
SNC12C kidney cancer cell line
SQ-5 cell line
SR leukemia cell line
SUMTG tumour cell line - CD44+
SUMTG_B tumour cell line - CD44+
SUP-B15 acute lymphoblastic leukemia cell line
SW-1271 SCLC cell line
SW480 colorectal adenocarcinoma cell line
SW620 colon cancer cell line
SW756 cervical cancer cell line
T1TG breast cancer cell line - CD44+
T1TG_B breast cancer cell line - CD44+
T2TG breast cancer cell line - CD44+
T2TG_B breast cancer cell line - CD44+
T3TG breast cancer cell line - CD44+
T3TG_B breast cancer cell line - CD44+
T47 breast carcinoma cell line
TAYA clear cell adenocarcinoma cell line
THP-1 acute monocytic leukemia cells
TK10 kidney cancer cell line
U251 CNS cancer cell line
U2OS osteosarcoma cell line
U87 glioblastoma (GBM) cells
U937 myeloid monocytic lymphoma cell line
UACC257 melanoma cell line
UACC62 melanoma cell line
UACC903 melanoma cell line
UO31 kidney cancer cell line
VCaP prostate cancer cell line
W99 prostate cancer cell line
WI-38 lung fibroblastic cell line
WM1205 melanoma cell line
WM35 melanoma cell line
WPMY1 prostate cancer cell line
WS1 skin fibroblasts
ZR-75-1 breast epithelial cancer cell line
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